Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889503.1_cds_XP_016444221.1_39305
CDS Infomation

[gene=LOC107769512] [db_xref=GeneID:107769512] [protein=FRIGIDA-like protein 3] [protein_id=XP_016444221.1] [location=join(15109..16159,16982..17154,17354..17767)] [gbkey=CDS]
Sequence

ATGGAAGATACAGAGTCAGTTGCAACATTGGTGGACTCTACAACATCCAAGATACAGCAA
CTACAGAAAGCATTCGCTGAGTTGGAAAGTCACCGTGCTGTTACTCTCAACCTGCAGTGG
AAGCAACTTGAAGAGCACTTTCATGGGCTTCAGAAGTCCTTGAAGAGGCGTTTCAATGAA
CTGGAAGACCAAGAGAAGGAGTTTGAGACAAAAATTTTCCAATCTAGGGAGATGTTGGAG
AAGCGTCAAGCAGCTGTTATTGCTAAAGAGCAAGCTTCACTTCAGAGGCTCCAGGAGAAA
AGAGATGCTGCAGTTTCCGCTATTGCTATCGCTCTTGAGAAGCATAGGAAGCCTTGTTCT
GTACAACCTGCTGTCATTAATTGTGAGGTTCAAGATGGGCCATCTATTCTGGAACAAAAG
CCTGATGATTTCATAGAGATTGGGCATGTTATAGAGGATACTGGAAAACCTTCTCAGGGT
GGTGGTGTGGAAGTTAAGTCTTATCCAGAGCTAGTGAAGCTGTGCCAAAATATGGATTCT
GAAGGCCTCCACAAATTCATATCAGACAACCGTAAAAACCTGGCAGCTCTTAGGGAGGAG
ATTCCACTTGCTTTAAGAGCTGCAACCAATCCTGCCTCTCTGGTTCTGGACTCACTGAAG
GGGTTTTACAACTCAGATTTGTCAATTTCTGATGCTAAAAAAGATGCTAATCTTTTGGGT
TTGCGGCGAACTTGTATTATGCTACTGGAATGCCTTAGTACTTTATTAAACACCCTGGAA
ATGAATTCTATTTCAAGTATAATATCAGAAAATGTAAAAGAACGTGCGAAAGGTATTGCT
GAGGAGTGGAACCCGAAGTTAGATGAACTTGACATTGATGCAAATAATGGAAATTCTTTG
GAGGCTCATGCATTCTTACAGCTACTTGCTACTTTTAGTATTAATTCCAATTTTAACCAG
GAGAACTTATCCAAGCTGATACCAATGGTTTCACGACGTCGTCAAACAGCTGATCTCTGT
CGTTCCCTTGGATTATCTGACAGAATGCCAGGTGTTATTGATGTGTTGATAAATAATGGA
AGACATATAGATGCTGTTAATCTAGCTTTTGCATTTGAGCTGACACAGCAGTTTCCACCT
GTATCTCTACTGAAATCCTACTTGAATGAAGCTAGCAAAGCATCTATACCTCTCAATTCT
GGAAATGCATCACCTACTGTGCAGAATGATGTCAATGAGAAAGAGTTGACTGCACTAAAG
GCCGTGTTAAAATGCATCGAAGACCATAAGCTTGAGGAGCACTACCCGGTGGACCCCCTT
CAGAAAAGGGTTCTTCAGCTGGAGAAAGCAAAGGCAGACAAGAAAAAGGCAACTGAAGTT
GCGAAACCTCAATCGAAAAGGCCTCGCCCCAATGGTGTCGGAAATGGCCTCCGAGTAAAT
AATGTTGTCATGGACAAAAACTTCTATCCCAGAATGACTGAGAGCTGCCCGCAATCCGTT
TATGACAGACCATATGCTCACCCTGGACCGACCAGCAACCATGTTCCTTTATTCATGGGT
GCTGCTGTTTACAACTTTTCTCCTGGCCATGACTTCTTTGGAAATGGCTACCATTACCAG
GCTCCTTACCTGCACTGA

Peptide Sequence

PEP ID

XP_016444221.1
PEP Infomation

PREDICTED: FRIGIDA-like protein 3 [Nicotiana tabacum]
Sequence

MEDTESVATLVDSTTSKIQQLQKAFAELESHRAVTLNLQWKQLEEHFHGLQKSLKRRFNE
LEDQEKEFETKIFQSREMLEKRQAAVIAKEQASLQRLQEKRDAAVSAIAIALEKHRKPCS
VQPAVINCEVQDGPSILEQKPDDFIEIGHVIEDTGKPSQGGGVEVKSYPELVKLCQNMDS
EGLHKFISDNRKNLAALREEIPLALRAATNPASLVLDSLKGFYNSDLSISDAKKDANLLG
LRRTCIMLLECLSTLLNTLEMNSISSIISENVKERAKGIAEEWNPKLDELDIDANNGNSL
EAHAFLQLLATFSINSNFNQENLSKLIPMVSRRRQTADLCRSLGLSDRMPGVIDVLINNG
RHIDAVNLAFAFELTQQFPPVSLLKSYLNEASKASIPLNSGNASPTVQNDVNEKELTALK
AVLKCIEDHKLEEHYPVDPLQKRVLQLEKAKADKKKATEVAKPQSKRPRPNGVGNGLRVN
NVVMDKNFYPRMTESCPQSVYDRPYAHPGPTSNHVPLFMGAAVYNFSPGHDFFGNGYHYQ
APYLH

Transcript Sequence

Gene sequence data has not been registered.